SMTL ID : 4p7w.1

L-proline-bound L-proline cis-4-hydroxylase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x CO: COBALT (II) ION(Non-covalent)

CO.1: 5 residues within 4Å: Chain A: H.118, D.120, R.130, H.166 Ligands: AKG.2 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.118, A:D.120, A:H.166

1 x AKG: 2-OXOGLUTARIC ACID(Non-covalent)

AKG.2: 13 residues within 4Å: Chain A: W.52, I.107, I.109, H.118, D.120, R.130, H.132, N.143, L.160, H.166, A.168, R.176 Ligands: CO.1 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:N.143 Salt bridges: A:R.130, A:H.132, A:H.132, A:H.166, A:R.176, A:H.178

1 x PRO: PROLINE(Non-covalent)

PRO.3: 8 residues within 4Å: Chain A: Y.44, F.47, W.52, V.69, R.105, I.115, D.120, R.130 6 PLIP interactions: 5 interactions with chain A, 1 Ligand-Ligand interactions Hydrophobic interactions: A:W.52, A:I.115 Hydrogen bonds: A:D.120, P.3 Salt bridges: A:R.105, A:R.130

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Koketsu, K. et al., Refined Regio- and Stereoselective Hydroxylation of l-Pipecolic Acid by Protein Engineering of l-Proline cis-4-Hydroxylase Based on the X-ray Crystal Structure. Acs Synth Biol (2015)

Release Date

2014-09-17

Peptides

L-proline cis-4-hydroxylase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

L-proline cis-4-hydroxylase

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