SMTL ID : 4p9k.1

CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM VERMINEPHROBACTER EISENIAE EF01-2 (Veis_3954, TARGET EFI-510324) A NEPHRIDIAL SYMBIONT OF THE EARTHWORM EISENIA FOETIDA, BOUND TO D-ERYTHRONATE WITH RESIDUAL DENSITY SUGGESTIVE OF SUPERPOSITION WITH COPURIFIED ALTERNATIVE LIGAND.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.40 Å

Oligo State

monomer

Ligands

1 x EAX: (2R,3R)-2,3,4-trihydroxybutanoic acid(Non-covalent)

EAX.1: 12 residues within 4Å: Chain A: S.34, T.35, Q.41, E.73, S.91, N.146, R.149, R.170, M.172, F.193, N.210, V.214 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:Q.41, A:Q.41, A:S.91, A:N.146, A:R.149, A:R.149, A:N.210 Water bridges: A:S.34, A:E.73, A:E.73, A:F.193 Salt bridges: A:R.149, A:R.170

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Vetting, M.W. et al., Experimental strategies for functional annotation and metabolism discovery: targeted screening of solute binding proteins and unbiased panning of metabolomes. Biochemistry (2015)

Release Date

2014-05-07

Peptides

TRAP dicarboxylate transporter, DctP subunit: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

TRAP dicarboxylate transporter, DctP subunit

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