SMTL ID : 4paf.1

CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM RUEGERIA POMEROYI DSS-3 (SPO1773, TARGET EFI-510260) WITH BOUND 3,4-DIHYDROXYBENZOATE

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

1 x DHB: 3,4-DIHYDROXYBENZOIC ACID(Non-covalent)

DHB.1: 15 residues within 4Å: Chain A: I.34, T.35, H.39, W.41, T.91, A.147, G.148, R.150, R.170, T.172, L.193, M.210, D.211, L.214, F.235 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:I.34, A:T.35, A:W.41, A:T.91, A:L.214, A:F.235 Hydrogen bonds: A:H.39, A:T.172, A:D.211 Water bridges: A:R.150 Salt bridges: A:R.150, A:R.170

1 x MLI: MALONATE ION(Non-functional Binders)

MLI.2: 4 residues within 4Å: Chain A: N.330, Y.332, F.333, Q.334 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.334

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Vetting, M.W. et al., Experimental strategies for functional annotation and metabolism discovery: targeted screening of solute binding proteins and unbiased panning of metabolomes. Biochemistry (2015)

Release Date

2014-05-07

Peptides

TRAP dicarboxylate transporter, DctP subunit, putative: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

TRAP dicarboxylate transporter, DctP subunit, putative

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