SMTL ID : 4pbb.1

The 5-Hydroxymethylcytosine-Specific Restriction Enzyme AbaSI

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.46 Å

Oligo State

homo-dimer

Ligands

5 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 6 residues within 4Å: Chain A: W.224, W.234, E.247, K.258, W.262, R.269 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.247 Salt bridges: A:K.258, A:R.269 SO4.2: 2 residues within 4Å: Chain A: R.210, G.211 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:G.211 Salt bridges: A:R.210 SO4.3: 6 residues within 4Å: Chain B: W.224, W.234, E.247, K.258, W.262, R.269 2 PLIP interactions: 2 interactions with chain B Salt bridges: B:K.258, B:R.269 SO4.4: 3 residues within 4Å: Chain B: R.210, G.211, G.212 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:G.211, B:G.212 SO4.5: 3 residues within 4Å: Chain B: R.15, S.280, R.282 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:S.280, B:S.280 Salt bridges: B:R.15, B:R.282

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Horton, J.R. et al., Structure of 5-hydroxymethylcytosine-specific restriction enzyme, AbaSI, in complex with DNA. Nucleic Acids Res. (2014)

Release Date

2014-06-25

Peptides

Uncharacterized protein AbaSI: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Uncharacterized protein AbaSI

Related Entries With Identical Sequence