SMTL ID : 4pc4.2 (4 other biounits)

Bombyx mori lipoprotein 6

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)

MES.1: 5 residues within 4Å: Chain A: R.78, K.79, F.81, L.83, R.86 2 PLIP interactions: 2 interactions with chain A Water bridges: A:R.86 Salt bridges: A:R.86

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 4 residues within 4Å: Chain A: N.72, G.73, Q.74, E.75 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Q.74, A:E.75 Water bridges: A:W.69, A:Q.74, A:I.76 EDO.3: 2 residues within 4Å: Chain A: W.139, N.142 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:W.139

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.4: 8 residues within 4Å: Chain A: K.106, G.108, S.109, T.110, Y.120, V.216, N.217, D.221 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:S.109, A:T.110, A:T.110, A:D.221 Water bridges: A:G.108, A:N.217

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pietrzyk, A.J. et al., Crystal structure of Bombyx mori lipoprotein 6: comparative structural analysis of the 30-kDa lipoprotein family. Plos One (2014)

Release Date

2015-03-04

Peptides

30K lipoprotein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

30K lipoprotein

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