SMTL ID : 4pcz.1

Crystal structure of a complex between R247G LlFPG mutant and a THF containing DNA

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.245, C.248, C.265, C.268 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.245, A:C.248, A:C.265, A:C.268

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 9 residues within 4Å: Chain A: Y.58, H.72, R.74, T.113, E.115, Y.125, K.129 Chain B: T.9, T.10 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:Y.58, A:Y.58, A:R.74, A:R.74, A:E.115, A:Y.125, A:K.129

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Biela, A. et al., Zinc finger oxidation of Fpg/Nei DNA glycosylases by 2-thioxanthine: biochemical and X-ray structural characterization. Nucleic Acids Res. (2014)

Release Date

2015-04-01

Peptides

Formamidopyrimidine-DNA glycosylase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Formamidopyrimidine-DNA glycosylase