SMTL ID : 4pdx.1

Crystal structure of Escherchia coli uncharacterized protein YjcS

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

homo-dimer

Ligands

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 7 residues within 4Å: Chain A: H.153, H.288, N.289, T.292, R.294, R.299, Y.387 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:N.289 Water bridges: A:Y.205 Salt bridges: A:H.153, A:H.288, A:R.294, A:R.299 SO4.2: 5 residues within 4Å: Chain A: K.372, L.373, A.378, R.384, V.390 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:L.373 Water bridges: A:R.384, A:R.384, A:R.384, A:R.384 Salt bridges: A:R.384 SO4.4: 7 residues within 4Å: Chain B: H.153, H.288, N.289, T.292, R.294, R.299, Y.387 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:N.289, B:Y.387, B:Y.387 Salt bridges: B:H.153, B:H.288, B:R.294, B:R.299

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 5 residues within 4Å: Chain A: A.482, E.483, S.484, W.487 Chain B: H.413 7 PLIP interactions: 1 interactions with chain B, 6 interactions with chain A Water bridges: B:H.413, A:Y.18, A:E.483, A:E.483, A:E.483 Hydrogen bonds: A:E.483, A:S.484 GOL.5: 5 residues within 4Å: Chain A: H.413 Chain B: A.482, E.483, S.484, W.487 5 PLIP interactions: 1 interactions with chain A, 4 interactions with chain B Water bridges: A:H.413, B:Y.18, B:V.390 Hydrogen bonds: B:E.483, B:S.484

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liang, Y.J. et al., Crystal structure of Escherchia coli uncharacterized protein YjcS. To Be Published

Release Date

2015-04-29

Peptides

Putative alkyl/aryl-sulfatase YjcS: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Putative alkyl/aryl-sulfatase YjcS