SMTL ID : 4pii.1

Crystal structure of hypothetical protein PF0907 from pyrococcus furiosus solved by sulfur SAD using Swiss light source data

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.17 Å

Oligo State

monomer

Ligands

9 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 3 residues within 4Å: Chain A: S.61, W.72, F.156 Ligand excluded by PLIP CL.2: 1 residues within 4Å: Chain A: G.68 Ligand excluded by PLIP CL.3: 3 residues within 4Å: Chain A: D.70, K.99, N.100 Ligand excluded by PLIP CL.4: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP CL.5: 3 residues within 4Å: Chain A: G.20, I.21, E.22 Ligand excluded by PLIP CL.6: 2 residues within 4Å: Chain A: Q.39, I.167 Ligand excluded by PLIP CL.7: 3 residues within 4Å: Chain A: L.104, E.106, A.107 Ligand excluded by PLIP CL.8: 3 residues within 4Å: Chain A: R.103, L.104, I.105 Ligand excluded by PLIP CL.9: 3 residues within 4Å: Chain A: T.123, L.124, K.125 Ligand excluded by PLIP

1 x IMD: IMIDAZOLE(Non-covalent)

IMD.10: 2 residues within 4Å: Chain A: F.118, T.121 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:T.121 pi-Stacking: A:F.118

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Weinert, T. et al., Fast native-SAD phasing for routine macromolecular structure determination. Nat.Methods (2015)

Release Date

2014-12-10

Peptides

N-glycosylase/DNA lyase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

N-glycosylase/DNA lyase

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