SMTL ID : 4pls.1

Crystal Structures of Designed Armadillo Repeat Proteins: Implications of Construct Design and Crystallization Conditions on Overall Structure.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.35 Å

Oligo State

homo-tetramer

Ligands

10 x CA: CALCIUM ION(Non-covalent)

CA.1: 4 residues within 4Å: Chain A: P.181, E.183 Chain C: P.55, E.57 5 PLIP interactions: 2 interactions with chain A, 1 interactions with chain C, 2 Ligand-Water interactions Metal complexes: A:P.181, A:E.183, C:P.55, H2O.1, H2O.6 CA.2: 4 residues within 4Å: Chain A: P.223, E.225 Chain D: P.223, E.225 5 PLIP interactions: 1 interactions with chain A, 2 interactions with chain D, 2 Ligand-Water interactions Metal complexes: A:P.223, D:P.223, D:E.225, H2O.1, H2O.7 CA.3: 4 residues within 4Å: Chain A: P.139, E.141 Chain C: P.97, E.99 5 PLIP interactions: 2 interactions with chain C, 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: C:P.97, C:E.99, A:P.139, A:E.141, H2O.6 CA.4: 4 residues within 4Å: Chain A: P.55, E.57 Chain C: P.181, E.183 5 PLIP interactions: 2 interactions with chain C, 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: C:P.181, C:E.183, A:P.55, A:E.57, H2O.2 CA.5: 4 residues within 4Å: Chain A: P.97, E.99 Chain C: P.139, E.141 5 PLIP interactions: 2 interactions with chain C, 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: C:P.139, C:E.141, A:P.97, A:E.99, H2O.2 CA.6: 4 residues within 4Å: Chain B: P.55, E.57 Chain D: P.181, E.183 5 PLIP interactions: 2 interactions with chain D, 2 interactions with chain B, 1 Ligand-Water interactions Metal complexes: D:P.181, D:E.183, B:P.55, B:E.57, H2O.5 CA.7: 4 residues within 4Å: Chain B: P.97, E.99 Chain D: P.139, E.141 5 PLIP interactions: 2 interactions with chain D, 2 interactions with chain B, 1 Ligand-Water interactions Metal complexes: D:P.139, D:E.141, B:P.97, B:E.99, H2O.4 CA.8: 4 residues within 4Å: Chain B: P.181, E.183 Chain D: P.55, E.57 6 PLIP interactions: 2 interactions with chain B, 2 interactions with chain D, 2 Ligand-Water interactions Metal complexes: B:P.181, B:E.183, D:P.55, D:E.57, H2O.4, H2O.8 CA.9: 4 residues within 4Å: Chain B: P.223, E.225 Chain D: P.13, Q.15 2 PLIP interactions: 1 interactions with chain B, 1 interactions with chain D Metal complexes: B:P.223, D:P.13 CA.11: 4 residues within 4Å: Chain B: P.139, E.141 Chain D: P.97, E.99 5 PLIP interactions: 2 interactions with chain D, 1 interactions with chain B, 2 Ligand-Water interactions Metal complexes: D:P.97, D:E.99, B:P.139, H2O.3, H2O.8

2 x ACT: ACETATE ION(Non-functional Binders)

ACT.10: 6 residues within 4Å: Chain B: A.155, S.156, G.157, I.162, N.195, S.198 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:A.155 ACT.12: 5 residues within 4Å: Chain C: A.155, S.156, G.157, I.162, S.198 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:S.198

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Reichen, C. et al., Crystal Structures of Designed Armadillo Repeat Proteins: Implications of Construct Design and Crystallization Conditions on Overall Structure. Protein Sci. (2014)

Release Date

2014-12-10

Peptides

Arm00010: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Arm00010