SMTL ID : 4ppe.2 (1 other biounit)

human RNF4 RING domain

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-tetramer

Ligands

8 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: C.18, C.21, R.33, C.45, C.48 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.18, A:C.21, A:C.45, A:C.48 ZN.2: 5 residues within 4Å: Chain A: T.38, C.40, H.42, C.59, C.62 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.40, A:H.42, A:C.59, A:C.62 ZN.3: 5 residues within 4Å: Chain B: C.18, C.21, R.33, C.45, C.48 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.18, B:C.21, B:C.45, B:C.48 ZN.4: 5 residues within 4Å: Chain B: T.38, C.40, H.42, C.59, C.62 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.40, B:H.42, B:C.59, B:C.62 ZN.5: 5 residues within 4Å: Chain C: C.18, C.21, R.33, C.45, C.48 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:C.18, C:C.21, C:C.45, C:C.48 ZN.6: 5 residues within 4Å: Chain C: T.38, C.40, H.42, C.59, C.62 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:C.40, C:H.42, C:C.59, C:C.62 ZN.7: 5 residues within 4Å: Chain D: C.18, C.21, R.33, C.45, C.48 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:C.18, D:C.21, D:C.45, D:C.48 ZN.8: 5 residues within 4Å: Chain D: T.38, C.40, H.42, C.59, C.62 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:C.40, D:H.42, D:C.59, D:C.62

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Groocock, L.M. et al., RNF4 interacts with both SUMO and nucleosomes to promote the DNA damage response. Embo Rep. (2014)

Release Date

2014-03-26

Peptides

E3 ubiquitin-protein ligase RNF4: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

E3 ubiquitin-protein ligase RNF4

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