SMTL ID : 4ppf.1

Mycobacterium tuberculosis RecA citrate bound low temperature structure IIA-N

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

1 x FLC: CITRATE ANION(Non-covalent)

FLC.1: 8 residues within 4Å: Chain A: E.69, S.70, S.71, G.72, K.73, T.74, T.75, Q.195 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:S.70, A:S.71, A:G.72, A:K.73, A:T.74, A:T.74, A:T.74, A:T.74, A:T.75, A:T.75 Water bridges: A:K.73 Salt bridges: A:K.73, A:K.73

2 x NA: SODIUM ION(Non-functional Binders)

NA.2: 2 residues within 4Å: Chain A: L.100, D.101 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.101 NA.6: 3 residues within 4Å: Chain A: I.46, R.271, E.321 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.321, A:E.321 Water bridges: A:I.46

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 7 residues within 4Å: Chain A: A.47, V.50, A.51, Q.258, A.259, M.278 Ligands: EDO.5 1 PLIP interactions: 1 interactions with chain A Water bridges: A:Q.258 EDO.4: 4 residues within 4Å: Chain A: F.218, Y.219, S.221, K.251 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:F.218, A:S.221, A:K.251 EDO.5: 4 residues within 4Å: Chain A: A.47, A.259, E.260 Ligands: EDO.3 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.260 EDO.7: 2 residues within 4Å: Chain A: A.87, D.140 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.59, A:A.87 Water bridges: A:R.59, A:D.140

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chandran, A.V. et al., Structural studies on Mycobacterium tuberculosis RecA: Molecular plasticity and interspecies variability. J.Biosci. (2015)

Release Date

2015-03-18

Peptides

Protein RecA, 1st part, 2nd part: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Protein RecA, 1st part, 2nd part

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