SMTL ID : 4pxj.1 (1 other biounit)

Crystallographic structure of the LZII fragment (anti-parallel orientation) from JIP3

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.06 Å

Oligo State

homo-dimer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: R.50 Chain B: K.22 Ligands: GAI.5 2 PLIP interactions: 1 interactions with chain A, 1 interactions with chain B Salt bridges: A:R.50, B:K.22

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 3 residues within 4Å: Chain A: N.17, I.20, A.21 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.17 Water bridges: A:N.17 EDO.3: 2 residues within 4Å: Chain A: R.34 Chain B: L.37 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.34 EDO.4: 3 residues within 4Å: Chain A: Q.30, R.34 Chain B: K.44 4 PLIP interactions: 3 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:Q.30, A:R.34, A:R.34, B:K.44 EDO.7: 3 residues within 4Å: Chain A: K.44 Chain B: Q.30, R.34 7 PLIP interactions: 4 interactions with chain B, 3 interactions with chain A Hydrogen bonds: B:Q.30, B:R.34, B:R.34, A:K.44 Water bridges: B:Q.30, A:K.41, A:K.44

2 x GAI: GUANIDINE(Non-covalent)

GAI.5: 4 residues within 4Å: Chain B: D.18, L.19, K.22 Ligands: SO4.1 1 PLIP interactions: 1 interactions with chain B Salt bridges: B:D.18 GAI.6: 2 residues within 4Å: Chain B: E.57, R.60 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Llinas, P. et al., Structure of a truncated form of leucine zipper II of JIP3 reveals an unexpected antiparallel coiled-coil arrangement. Acta Crystallogr F Struct Biol Commun (2016)

Release Date

2015-06-10

Peptides

C-Jun-amino-terminal kinase-interacting protein 3: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C-Jun-amino-terminal kinase-interacting protein 3

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