SMTL ID : 4pya.1

MoaC K51A in complex with 3',8-cH2GTP

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.79 Å

Oligo State

homo-trimer

Ligands

21 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 4 residues within 4Å: Chain A: N.87, Q.89, R.98, E.100 Ligand excluded by PLIP EDO.2: 3 residues within 4Å: Chain A: L.144, L.145, A.146 Ligand excluded by PLIP EDO.3: 4 residues within 4Å: Chain A: T.40, M.43, M.129, C.130 Ligand excluded by PLIP EDO.4: 6 residues within 4Å: Chain A: L.75, C.76, H.77, P.78 Chain B: K.67, L.81 Ligand excluded by PLIP EDO.5: 4 residues within 4Å: Chain A: F.33, R.96, P.141, R.143 Ligand excluded by PLIP EDO.6: 4 residues within 4Å: Chain A: V.138, I.139, G.140, P.141 Ligand excluded by PLIP EDO.7: 2 residues within 4Å: Chain A: G.52, M.129 Ligand excluded by PLIP EDO.9: 4 residues within 4Å: Chain B: N.87, Q.89, R.98, E.100 Ligand excluded by PLIP EDO.10: 3 residues within 4Å: Chain B: L.144, L.145, A.146 Ligand excluded by PLIP EDO.11: 4 residues within 4Å: Chain B: T.40, M.43, M.129, C.130 Ligand excluded by PLIP EDO.12: 6 residues within 4Å: Chain B: L.75, C.76, H.77, P.78 Chain C: K.67, L.81 Ligand excluded by PLIP EDO.13: 4 residues within 4Å: Chain B: F.33, R.96, P.141, R.143 Ligand excluded by PLIP EDO.14: 4 residues within 4Å: Chain B: V.138, I.139, G.140, P.141 Ligand excluded by PLIP EDO.15: 2 residues within 4Å: Chain B: G.52, M.129 Ligand excluded by PLIP EDO.17: 4 residues within 4Å: Chain C: N.87, Q.89, R.98, E.100 Ligand excluded by PLIP EDO.18: 3 residues within 4Å: Chain C: L.144, L.145, A.146 Ligand excluded by PLIP EDO.19: 4 residues within 4Å: Chain C: T.40, M.43, M.129, C.130 Ligand excluded by PLIP EDO.20: 6 residues within 4Å: Chain A: K.67, L.81 Chain C: L.75, C.76, H.77, P.78 Ligand excluded by PLIP EDO.21: 4 residues within 4Å: Chain C: F.33, R.96, P.141, R.143 Ligand excluded by PLIP EDO.22: 4 residues within 4Å: Chain C: V.138, I.139, G.140, P.141 Ligand excluded by PLIP EDO.23: 2 residues within 4Å: Chain C: G.52, M.129 Ligand excluded by PLIP

3 x 2X3: (8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphate(Non-covalent)

2X3.8: 11 residues within 4Å: Chain A: L.75, C.76, H.77, L.79, T.109, G.110, V.111, E.112, M.113, E.114 Chain B: S.82 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:L.75, A:H.77, A:H.77, A:E.112, A:E.112, A:M.113 Salt bridges: A:H.77, A:E.114 2X3.16: 11 residues within 4Å: Chain B: L.75, C.76, H.77, L.79, T.109, G.110, V.111, E.112, M.113, E.114 Chain C: S.82 8 PLIP interactions: 8 interactions with chain B Hydrogen bonds: B:L.75, B:H.77, B:H.77, B:E.112, B:E.112, B:M.113 Salt bridges: B:H.77, B:E.114 2X3.24: 11 residues within 4Å: Chain A: S.82 Chain C: L.75, C.76, H.77, L.79, T.109, G.110, V.111, E.112, M.113, E.114 8 PLIP interactions: 8 interactions with chain C Hydrogen bonds: C:L.75, C:H.77, C:H.77, C:E.112, C:E.112, C:M.113 Salt bridges: C:H.77, C:E.114

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hover, B.M. et al., Mechanism of pyranopterin ring formation in molybdenum cofactor biosynthesis. Proc.Natl.Acad.Sci.USA (2015)

Release Date

2015-04-29

Peptides

Molybdenum cofactor biosynthesis protein MoaC: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

Molybdenum cofactor biosynthesis protein MoaC