SMTL ID : 4pzi.1

Zinc finger region of MLL2 in complex with CpG DNA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.15 Å

Oligo State

monomer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 6 residues within 4Å: Chain A: C.13, G.14, C.16, C.19, C.52, D.53 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.13, A:C.16, A:C.19, A:C.52 ZN.2: 5 residues within 4Å: Chain A: C.25, G.26, C.28, C.31, C.47 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.25, A:C.28, A:C.31, A:C.47

1 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)

UNX.3: 3 residues within 4Å: Chain A: K.59, R.62 Chain C: G.7 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xu, C. et al., DNA Sequence Recognition of Human CXXC Domains and Their Structural Determinants. Structure (2018)

Release Date

2014-06-04

Peptides

Histone-lysine N-methyltransferase 2B: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Histone-lysine N-methyltransferase 2B