- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.16 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x CL: CHLORIDE ION(Non-functional Binders)
- 6 x IPA: ISOPROPYL ALCOHOL(Non-functional Binders)
- 2 x LBV: 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium -2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3- yl]propanoic acid(Covalent)
LBV.5: 32 residues within 4Å:- Chain A: T.35, T.36, C.39, E.42, I.44, M.189, Y.191, V.201, F.213, F.218, S.221, D.222, I.223, P.224, Q.226, A.227, Y.231, R.237, R.269, T.271, S.272, M.274, H.275, Y.278, L.279, M.282, S.287, L.288, S.289, L.301, A.303, H.305
30 PLIP interactions:30 interactions with chain A- Hydrophobic interactions: A:I.44, A:Y.191, A:F.213, A:F.218, A:F.218, A:D.222, A:I.223, A:I.223, A:P.224, A:A.227, A:Y.231, A:H.275, A:Y.278, A:L.301
- Hydrogen bonds: A:D.222, A:D.222, A:D.222, A:Y.231, A:S.272, A:H.275, A:S.287, A:H.305
- Water bridges: A:D.222, A:R.269, A:R.269, A:L.288, A:L.288
- Salt bridges: A:R.269, A:H.275
- pi-Stacking: A:H.275
LBV.10: 32 residues within 4Å:- Chain B: T.35, T.36, C.39, E.42, I.44, M.189, Y.191, V.201, F.213, F.218, S.221, D.222, I.223, P.224, Q.226, A.227, Y.231, R.237, R.269, T.271, S.272, M.274, H.275, Y.278, L.279, M.282, S.287, L.288, S.289, L.301, A.303, H.305
29 PLIP interactions:29 interactions with chain B- Hydrophobic interactions: B:I.44, B:Y.191, B:F.213, B:F.218, B:F.218, B:D.222, B:I.223, B:I.223, B:P.224, B:A.227, B:Y.231, B:H.275, B:Y.278, B:L.301
- Hydrogen bonds: B:D.222, B:D.222, B:D.222, B:Y.231, B:S.272, B:H.275, B:S.287, B:H.305
- Water bridges: B:R.269, B:R.269, B:L.288, B:L.288
- Salt bridges: B:R.269, B:H.275
- pi-Stacking: B:H.275
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Burgie, E.S. et al., Crystallographic and Electron Microscopic Analyses of a Bacterial Phytochrome Reveal Local and Global Rearrangements during Photoconversion. J.Biol.Chem. (2014)
- Release Date
- 2014-07-16
- Peptides
- Bacteriophytochrome: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.16 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x CL: CHLORIDE ION(Non-functional Binders)
- 6 x IPA: ISOPROPYL ALCOHOL(Non-functional Binders)
- 2 x LBV: 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium -2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3- yl]propanoic acid(Covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Burgie, E.S. et al., Crystallographic and Electron Microscopic Analyses of a Bacterial Phytochrome Reveal Local and Global Rearrangements during Photoconversion. J.Biol.Chem. (2014)
- Release Date
- 2014-07-16
- Peptides
- Bacteriophytochrome: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A