SMTL ID : 4q0n.7 (7 other biounits)

Crystal Structure of the fifth bromodomain of Human Poly-bromodomain containing protein 1 (PB1) in complex with a hydroxyphenyl-propenone ligand

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.78 Å

Oligo State

monomer

Ligands

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 5 residues within 4Å: Chain A: F.111, N.112, C.115, L.129, H.132 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:F.111 EDO.2: 5 residues within 4Å: Chain A: R.57, I.62, L.123, I.124, D.127 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.57, A:D.127

1 x 2XD: (2E)-1-(2-hydroxyphenyl)-3-(2,4,5,7-tetrahydro-6H-pyrazolo[3,4-c]pyridin-6-yl)prop-2-en-1-one(Non-covalent)

2XD.3: 12 residues within 4Å: Chain A: I.62, F.63, L.66, P.67, Y.75, M.83, D.84, M.110, N.113, A.114, N.118, I.124 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:L.66, A:D.84 Hydrogen bonds: A:Y.75, A:N.118 pi-Stacking: A:F.63

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Filippakopoulos, P. et al., Crystal Structure of the fifth bromodomain of Human Poly-bromodomain containing protein 1 (PB1) in complex with a hydroxyphenyl-propenone ligand. To be Published

Release Date

2014-05-07

Peptides

Protein polybromo-1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
G

Protein polybromo-1

Related Entries With Identical Sequence