SMTL ID : 4q2t.1 (1 other biounit)

Crystal structure of Arginyl-tRNA synthetase complexed with L-arginine

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

1 x ARG: ARGININE(Non-covalent)

ARG.1: 13 residues within 4Å: Chain A: D.144, S.147, N.149, H.158, H.184, G.186, Y.331, D.335, Y.353, V.355, Q.359, F.363 Ligands: GOL.2 12 PLIP interactions: 9 interactions with chain A, 3 Ligand-Ligand interactions Hydrogen bonds: A:N.149, A:N.149, A:N.149, A:G.186, A:Y.331, A:Q.359, R.1 Salt bridges: A:D.144, A:H.158, A:D.335 Water bridges: R.1, R.1

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 12 residues within 4Å: Chain A: S.146, S.147, H.155, G.157, H.158, S.161, V.354, V.355, D.356, Q.359, F.388 Ligands: ARG.1 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:S.146, A:H.155, A:S.161, A:D.356, A:D.356, A:Q.359

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kim, H.S. et al., The crystal structure of arginyl-tRNA synthetase from Homo sapiens. Febs Lett. (2014)

Release Date

2014-07-23

Peptides

Arginine--tRNA ligase, cytoplasmic: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Arginine--tRNA ligase, cytoplasmic

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