SMTL ID : 4q38.1

The crystal structure of acyltransferase in complex with decanoyl-CoA and teicoplanin

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.99 Å

Oligo State

monomer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: H.100, A.106, K.107, R.109 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:K.107 Water bridges: A:R.109, A:R.109, A:R.109, A:R.109 Salt bridges: A:K.107, A:R.109 SO4.2: 1 residues within 4Å: Chain A: R.237 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.237

1 x COA: COENZYME A(Non-covalent)

COA.3: 19 residues within 4Å: Chain A: R.193, V.212, E.214, G.217, P.218, L.219, S.251, W.252, M.253, S.266, N.267, I.268, F.296, V.297, S.312, S.313, L.314, E.315 Ligands: TEC.4 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:V.212, A:F.296 Hydrogen bonds: A:V.212, A:L.219, A:S.266, A:N.267, A:N.267, A:I.268, A:F.296, A:S.312, A:S.313, A:L.314 Water bridges: A:E.214, A:S.313

1 x TEC: 2-amino-6-O-decanoyl-2-deoxy-beta-D-glucopyranose(Non-covalent)

TEC.4: 18 residues within 4Å: Chain A: Q.157, M.176, W.178, W.179, L.210, H.211, V.212, L.219, G.249, S.250, S.251, M.253, L.254, I.268, A.272, W.275, F.296 Ligands: COA.3 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:L.219, A:L.254 Hydrogen bonds: A:V.212 Water bridges: A:Q.157, A:Q.157, A:E.160 Salt bridges: A:H.211

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lyu, S.Y. et al., Multiple complexes of long aliphatic N-acyltransferases lead to synthesis of 2,6-diacylated/2-acyl-substituted glycopeptide antibiotics, effectively killing vancomycin-resistant enterococcus. J.Am.Chem.Soc. (2014)

Release Date

2014-09-10

Peptides

Putative uncharacterized protein tcp24: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Putative uncharacterized protein tcp24

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