SMTL ID : 4q6a.1

Staphylococcus aureus V31L, F98Y Mutant Dihydrofolate Reductase Complexed with NADPH

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

1 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NAP.1: 28 residues within 4Å: Chain A: V.7, A.8, I.15, G.16, F.17, N.19, Q.20, L.21, W.23, G.44, R.45, K.46, T.47, L.63, T.64, S.65, H.78, I.80, F.93, G.94, G.95, Q.96, T.97, L.98, Y.99, E.101, T.122 Ligands: ACT.3 29 PLIP interactions: 29 interactions with chain A Hydrophobic interactions: A:L.21, A:T.47, A:F.93 Hydrogen bonds: A:A.8, A:I.15, A:N.19, A:N.19, A:G.44, A:R.45, A:R.45, A:K.46, A:T.47, A:S.65, A:G.95, A:Q.96, A:T.97, A:T.97, A:L.98, A:E.101, A:T.122 Water bridges: A:N.19, A:K.46, A:S.65, A:S.65, A:I.80, A:I.80, A:T.122 Salt bridges: A:R.45, A:K.46

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 9 residues within 4Å: Chain A: L.6, V.7, A.8, D.28, H.31, L.32, Y.110, I.111, T.112 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:D.28, A:H.31, A:Y.110, A:T.112 Water bridges: A:D.28, A:D.28, A:D.28

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.3: 2 residues within 4Å: Chain A: S.50 Ligands: NAP.1 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Reeve, S.M. et al., Protein design algorithms predict viable resistance to an experimental antifolate. Proc.Natl.Acad.Sci.USA (2015)

Release Date

2014-12-31

Peptides

Dihydrofolate reductase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Dihydrofolate reductase