SMTL ID : 4q74.1

F241A Fc

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.19 Å

Oligo State

homo-dimer

Ligands

1 x NAG- NAG- BMA- MAN- NAG- GAL- FUC: beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA-MAN-NAG-GAL-FUC.1: 13 residues within 4Å: Chain A: F.27, P.28, P.29, K.30, E.42, T.44, V.48, D.49, Q.79, Y.80, N.81, T.83, R.85 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:Y.80 Hydrogen bonds: A:K.30, A:K.30, A:D.33, A:E.42, A:E.42, A:T.44, A:T.44, A:R.85, A:K.30, A:R.85 Water bridges: A:P.28, A:P.29

1 x NAG- NAG- BMA- MAN- NAG- GAL- MAN- NAG- FUC: beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA-MAN-NAG-GAL-MAN-NAG-FUC.2: 13 residues within 4Å: Chain B: S.23, F.27, P.28, P.29, E.42, T.44, V.48, D.49, Q.79, N.81, T.83, R.85, K.118 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:F.27, B:K.30, B:E.42, B:E.42 Water bridges: B:S.23

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ahmed, A.A. et al., Structural characterization of anti-inflammatory immunoglobulin g fc proteins. J.Mol.Biol. (2014)

Release Date

2014-07-23

Peptides

Ig gamma-1 chain C region: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Ig gamma-1 chain C region