SMTL ID : 4q7d.1

Wild type Fc (wtFc)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.35 Å

Oligo State

homo-dimer

Ligands

2 x NAG- NAG- BMA- MAN- NAG- MAN- NAG- FUC: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose(Non-covalent)

NAG-NAG-BMA-MAN-NAG-MAN-NAG-FUC.1: 13 residues within 4Å: Chain A: F.16, F.18, K.21, T.35, V.37, V.39, D.40, Q.70, N.72, R.76, K.109 Ligands: NAG-NAG-BMA-MAN-NAG-MAN-NAG-FUC.2, NAG-NAG-BMA-MAN-NAG-MAN-NAG-FUC.2 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.21 NAG-NAG-BMA-MAN-NAG-MAN-NAG-FUC.2: 12 residues within 4Å: Chain B: F.16, F.18, K.21, T.35, V.39, D.40, Q.70, N.72, T.74, R.76, K.109 Ligands: NAG-NAG-BMA-MAN-NAG-MAN-NAG-FUC.1 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:R.76, B:K.21, B:K.21

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ahmed, A.A. et al., Structural characterization of anti-inflammatory immunoglobulin g fc proteins. J.Mol.Biol. (2014)

Release Date

2014-07-23

Peptides

Ig gamma-1 chain C region: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Ig gamma-1 chain C region

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