SMTL ID : 4q9x.1

mTFP* PdCl2 soak

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

8 x PD: PALLADIUM ION(Non-covalent)

PD.1: 3 residues within 4Å: Chain A: K.100, K.119, E.121 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.121, H2O.1 PD.2: 3 residues within 4Å: Chain A: D.7, K.32 Ligands: CL.12 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.7, A:D.7, H2O.2, H2O.2 PD.3: 2 residues within 4Å: Chain A: E.43, K.45 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:E.43 PD.4: 2 residues within 4Å: Chain A: K.133, E.162 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:E.162 PD.5: 1 residues within 4Å: Chain A: K.152 No protein-ligand interaction detected (PLIP) PD.6: 1 residues within 4Å: Chain A: K.11 No protein-ligand interaction detected (PLIP) PD.7: 2 residues within 4Å: Chain A: E.115, Y.117 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:E.115 PD.14: 1 residues within 4Å: Chain A: M.130 No protein-ligand interaction detected (PLIP)

5 x CL: CHLORIDE ION(Non-functional Binders)

CL.8: 1 residues within 4Å: Chain A: K.158 Ligand excluded by PLIP CL.9: 3 residues within 4Å: Chain A: E.88, T.90, K.172 Ligand excluded by PLIP CL.10: 2 residues within 4Å: Chain A: K.9, D.110 Ligand excluded by PLIP CL.12: 3 residues within 4Å: Chain A: D.7, K.32 Ligands: PD.2 Ligand excluded by PLIP CL.13: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP

1 x CO3: CARBONATE ION(Non-functional Binders)

CO3.11: 4 residues within 4Å: Chain A: K.156, D.170, F.171, K.172 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:F.171

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fischer, J. et al., mTFP*: An imperishable and versatile protein host for anchoring diverse ligands and organocatalysts. To be Published

Release Date

2014-05-21

Peptides

GFP-like fluorescent chromoprotein cFP484: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

GFP-like fluorescent chromoprotein cFP484

Related Entries With Identical Sequence