SMTL ID : 4qds.1

Physical basis for Nrp2 ligand binding

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-dimer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 2 residues within 4Å: Chain A: H.42, F.155 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:H.42

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.2: 2 residues within 4Å: Chain B: T.121, E.122 2 PLIP interactions: 2 interactions with chain B Hydrophobic interactions: B:E.122 Hydrogen bonds: B:T.121

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Parker, M.W. et al., Structural Basis for VEGF-C Binding to Neuropilin-2 and Sequestration by a Soluble Splice Form. Structure (2015)

Release Date

2015-04-15

Peptides

Neuropilin-2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Neuropilin-2