SMTL ID : 4qf5.1 (1 other biounit)

Crystal structure I of MurF from Acinetobacter baumannii

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

monomer

Ligands

1 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)

ATP.1: 20 residues within 4Å: Chain A: S.129, G.130, K.131, T.132, T.133, N.156, E.178, N.203, H.298, N.302, R.333, L.334, D.347, N.350, T.354, S.355, A.358, K.454 Ligands: MG.2, MG.3 18 PLIP interactions: 18 interactions with chain A Hydrogen bonds: A:S.129, A:G.130, A:G.130, A:K.131, A:T.132, A:T.133, A:T.133, A:N.156, A:N.302, A:N.302, A:D.347, A:N.350, A:K.454 Salt bridges: A:K.131, A:K.131, A:R.333 pi-Cation interactions: A:H.298, A:H.298

2 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 4 residues within 4Å: Chain A: T.132, N.156, E.178 Ligands: ATP.1 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:T.132, A:E.178 MG.3: 3 residues within 4Å: Chain A: H.208, K.222 Ligands: ATP.1 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:H.208

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cha, S.S. et al., ATP-binding mode including a carbamoylated lysine and two Mg(2+) ions, and substrate-binding mode in Acinetobacter baumannii MurF. Biochem.Biophys.Res.Commun. (2014)

Release Date

2015-04-01

Peptides

UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase

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