SMTL ID : 4qf6.3 (2 other biounits)

Structure of Aldehyde Dehydrogenase from Bacillus cereus, E194S mutant

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-tetramer

Ligands

8 x NA: SODIUM ION(Non-functional Binders)

NA.1: 4 residues within 4Å: Chain A: T.39, Y.40, D.108, Q.195 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.40, A:D.108, A:Q.195 NA.2: 4 residues within 4Å: Chain A: K.467, G.470, I.471 Chain B: I.260 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.467 NA.3: 4 residues within 4Å: Chain B: T.39, Y.40, D.108, Q.195 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:Y.40, B:Y.40, B:D.108 NA.4: 4 residues within 4Å: Chain A: I.260 Chain B: K.467, G.470, I.471 2 PLIP interactions: 1 interactions with chain A, 1 interactions with chain B Water bridges: A:H.262 Hydrogen bonds: B:G.470 NA.5: 4 residues within 4Å: Chain C: T.39, Y.40, D.108, Q.195 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:T.39, C:Y.40 NA.6: 4 residues within 4Å: Chain C: K.467, G.470, I.471 Chain D: I.260 1 PLIP interactions: 1 interactions with chain D Hydrogen bonds: D:I.260 NA.7: 4 residues within 4Å: Chain D: T.39, Y.40, D.108, Q.195 2 PLIP interactions: 2 interactions with chain D Hydrogen bonds: D:T.39, D:Y.40 NA.8: 3 residues within 4Å: Chain C: I.260 Chain D: K.467, G.470 1 PLIP interactions: 1 interactions with chain D Hydrogen bonds: D:G.470

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ngo, H.P.T. et al., Structural and Kinetic Analysis for Cofactor-binding Residues in Mammalian-like Aldehyde Dehydrogenase from Bacillus cereus Involved in Oxidation and Reduction Activity for All-trans-retinal. To be Published

Release Date

2015-05-20

Peptides

Aldehyde dehydrogenase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
F

B
J

C
K

D
L

Aldehyde dehydrogenase

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