SMTL ID : 4qfe.4 (3 other biounits)

Crystal Structure of an Enoyl-CoA hydratase from Mycobacterium smegmatis

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

homo-trimer

Ligands

11 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 3 residues within 4Å: Chain A: R.190, Q.191, E.194 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.191 EDO.2: 2 residues within 4Å: Chain A: R.11, R.190 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.11 EDO.4: 7 residues within 4Å: Chain A: M.95, D.96, L.97, V.101, W.119, D.121, R.212 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:M.95, A:L.97, A:D.121, A:R.212 Water bridges: A:D.96, A:D.96, A:D.96 EDO.7: 1 residues within 4Å: Chain B: N.62 No protein-ligand interaction detected (PLIP) EDO.8: 7 residues within 4Å: Chain B: M.95, D.96, L.97, V.101, W.119, D.121, R.212 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:M.95, B:L.97, B:D.121, B:D.121, B:R.212 Water bridges: B:D.96, B:R.212 EDO.9: 3 residues within 4Å: Chain A: R.182 Chain B: R.167, E.173 4 PLIP interactions: 3 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:R.167, A:R.182 Water bridges: B:A.168, B:E.173 EDO.10: 3 residues within 4Å: Chain B: Y.175, R.182, V.183 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:V.183 EDO.11: 5 residues within 4Å: Chain B: L.118, R.149, R.152, L.153 Chain C: H.156 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:L.118 Water bridges: B:R.152 EDO.12: 4 residues within 4Å: Chain B: R.25, P.26, E.27, A.28 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:R.25, B:E.27, B:A.28 Water bridges: B:R.25 EDO.13: 6 residues within 4Å: Chain C: L.118, R.149, R.152, L.153, L.216, W.219 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:L.118 EDO.14: 7 residues within 4Å: Chain C: M.95, D.96, L.97, V.101, W.119, D.121, R.212 4 PLIP interactions: 4 interactions with chain C Hydrogen bonds: C:M.95, C:L.97, C:D.121, C:R.212

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.3: 7 residues within 4Å: Chain A: L.153, I.154, G.155 Chain B: I.154, G.155 Chain C: I.154, G.155 8 PLIP interactions: 4 interactions with chain C, 2 interactions with chain B, 2 interactions with chain A Water bridges: C:G.155, C:R.158, C:R.158, C:R.158, B:S.157, A:R.158 Hydrogen bonds: B:I.154, A:I.154

1 x NA: SODIUM ION(Non-functional Binders)

NA.5: 3 residues within 4Å: Chain A: G.220 Chain B: G.220 Chain C: G.220 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:G.220

1 x EOH: ETHANOL(Non-functional Binders)

EOH.6: 3 residues within 4Å: Chain B: P.35, A.38, A.39 2 PLIP interactions: 2 interactions with chain B Hydrophobic interactions: B:P.35 Hydrogen bonds: B:A.39

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dranow, D.M. et al., Crystal Structure of an Enoyl-CoA hydratase from Mycobacterium smegmatis. TO BE PUBLISHED

Release Date

2014-06-04

Peptides

Enoyl-CoA hydratase: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
G

B
I

C
L

Enoyl-CoA hydratase

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