SMTL ID : 4qgw.1 (1 other biounit)

Crystal sturcture of the R132K:R111L:L121D mutant of Cellular Retinoic Acid Binding ProteinII complexed with a synthetic ligand (Merocyanine) at 1.77 angstrom resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.77 Å

Oligo State

monomer

Ligands

1 x LMC: (2E,4E,6E)-3-METHYL-6-(1,3,3-TRIMETHYL-1,3-DIHYDRO-2H-INDOL-2-YLIDENE)HEXA-2,4-DIENAL(Covalent)

LMC.1: 10 residues within 4Å: Chain A: S.12, F.15, A.32, V.33, A.34, A.35, S.37, K.38, P.39, K.132 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:F.15, A:F.15, A:K.38, A:K.132

1 x B3P: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-covalent)

B3P.2: 11 residues within 4Å: Chain A: F.15, V.41, I.52, T.54, I.63, V.76, W.109, L.111, D.121, M.123, K.132 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:W.109 Hydrogen bonds: A:D.121, A:Y.134 Water bridges: A:T.54, A:T.54, A:T.54, A:T.61, A:D.121

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yapici, I. et al., Turn-on" protein fluorescence: in situ formation of cyanine dyes. J.Am.Chem.Soc. (2015)

Release Date

2015-01-28

Peptides

Cellular retinoic acid-binding protein 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cellular retinoic acid-binding protein 2

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