- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.42 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x IMP: INOSINIC ACID(Non-covalent)
- 4 x N09: N-(4-chloro-3-methoxyphenyl)-2-(4-oxochromeno[4,3-c]pyrazol-1(4H)-yl)acetamide(Non-covalent)
N09.2: 12 residues within 4Å:- Chain A: A.126, H.127, T.182, M.263, G.264, M.269, E.290
- Chain D: P.29, S.315, G.318, Y.319
- Ligands: IMP.1
4 PLIP interactions:3 interactions with chain A, 1 interactions with chain D- Hydrophobic interactions: A:A.126, A:E.290
- Hydrogen bonds: A:E.290
- pi-Stacking: D:Y.319
N09.4: 13 residues within 4Å:- Chain A: P.29, S.315, G.318, Y.319
- Chain B: S.125, A.126, H.127, T.182, M.263, G.264, M.269, E.290
- Ligands: IMP.3
5 PLIP interactions:2 interactions with chain A, 3 interactions with chain B- Hydrophobic interactions: A:P.29, A:Y.319, B:A.126, B:E.290
- Hydrogen bonds: B:E.290
N09.5: 13 residues within 4Å:- Chain B: V.27, P.29, S.315, G.318, Y.319
- Chain C: S.125, A.126, H.127, T.182, M.263, G.264, E.290
- Ligands: IMP.7
4 PLIP interactions:2 interactions with chain C, 2 interactions with chain B- Hydrophobic interactions: C:A.126, B:P.29, B:Y.319
- Hydrogen bonds: C:E.290
N09.10: 13 residues within 4Å:- Chain C: L.28, P.29, S.315, G.318, Y.319
- Chain D: A.126, H.127, T.182, M.263, G.264, M.269, E.290
- Ligands: IMP.9
6 PLIP interactions:4 interactions with chain D, 2 interactions with chain C- Hydrophobic interactions: D:A.126, D:E.290, C:P.29, C:Y.319
- Hydrogen bonds: D:E.290
- Water bridges: D:A.126
- 1 x ACY: ACETIC ACID(Non-functional Binders)
- 3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.8: 8 residues within 4Å:- Chain C: T.338, T.339, S.340
- Chain D: E.16, D.17, I.337, T.338, T.339
7 PLIP interactions:3 interactions with chain C, 4 interactions with chain D- Hydrogen bonds: C:S.340, C:S.340, D:E.16, D:D.17, D:T.339, D:T.339
- Water bridges: C:T.339
EDO.11: 5 residues within 4Å:- Chain D: R.217, I.238, K.299, M.357, N.358
3 PLIP interactions:3 interactions with chain D- Hydrogen bonds: D:K.299, D:K.299, D:N.358
EDO.13: 5 residues within 4Å:- Chain A: G.5
- Chain D: I.9, G.10, K.11, T.194
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:G.5, A:G.5
- 1 x FMT: FORMIC ACID(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kim, Y. et al., Co-crystal structure of the catalytic domain of the inosine monophosphate dehydrogenase from Cryptosporidium parvum with inhibitor N109. To be Published
- Release Date
- 2014-08-06
- Peptides
- Inosine-5'-monophosphate dehydrogenase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.42 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x IMP: INOSINIC ACID(Non-covalent)
- 4 x N09: N-(4-chloro-3-methoxyphenyl)-2-(4-oxochromeno[4,3-c]pyrazol-1(4H)-yl)acetamide(Non-covalent)
- 1 x ACY: ACETIC ACID(Non-functional Binders)
- 3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 1 x FMT: FORMIC ACID(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kim, Y. et al., Co-crystal structure of the catalytic domain of the inosine monophosphate dehydrogenase from Cryptosporidium parvum with inhibitor N109. To be Published
- Release Date
- 2014-08-06
- Peptides
- Inosine-5'-monophosphate dehydrogenase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D