SMTL ID : 4qj8.2 (1 other biounit)

Crystal structure of inactive HIV-1 protease variant (I50V/A71V) in complex with p1-p6 substrate variant (P453L)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

hetero-oligomer

Ligands

3 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 1 residues within 4Å: Chain A: K.70 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:K.70 PO4.2: 5 residues within 4Å: Chain A: W.6, K.7, R.8 Chain B: R.87 Chain C: R.1 5 PLIP interactions: 1 interactions with chain C, 2 interactions with chain A, 2 interactions with chain B Salt bridges: C:R.1, B:R.87 Hydrogen bonds: A:R.8, A:R.8 Water bridges: B:R.87 PO4.3: 4 residues within 4Å: Chain A: R.87 Chain B: K.7, R.8 Chain C: R.9 5 PLIP interactions: 2 interactions with chain A, 2 interactions with chain B, 1 interactions with chain C Water bridges: A:R.87 Salt bridges: A:R.87, B:R.8, C:R.9 Hydrogen bonds: B:R.8

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ozen, A. et al., Structural basis and distal effects of Gag substrate coevolution in drug resistance to HIV-1 protease. Proc.Natl.Acad.Sci.USA (2014)

Release Date

2014-10-29

Peptides

Protease: AB
p1-p6 peptide: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

C
F

Protease

p1-p6 peptide

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