SMTL ID : 4qku.1 (1 other biounit)

Crystal structure of a putative hydrolase from Burkholderia cenocepacia

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.45 Å

Oligo State

homo-dimer

Ligands

2 x NA: SODIUM ION(Non-functional Binders)

NA.1: 5 residues within 4Å: Chain A: D.256, W.257, K.276, A.279, T.280 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.256 NA.4: 5 residues within 4Å: Chain B: D.256, W.257, K.276, A.279, T.280 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:D.256

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 11 residues within 4Å: Chain A: R.197, R.198, P.199, N.200, A.438, R.439 Chain B: G.236, P.238, V.358, A.359, G.360 5 PLIP interactions: 4 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:R.198, A:N.200, A:N.200, A:R.439, B:V.358 EDO.5: 10 residues within 4Å: Chain A: G.236, V.358, A.359, G.360 Chain B: R.197, R.198, P.199, N.200, A.438, R.439 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:N.200, B:N.200, B:N.200, B:R.439

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 7 residues within 4Å: Chain A: Y.151, H.156, V.160, E.222, R.260, Q.263, K.276 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:Y.151, A:Q.263, A:T.373 Water bridges: A:H.156, A:E.222 Salt bridges: A:H.156, A:R.260, A:K.276 SO4.6: 8 residues within 4Å: Chain B: Y.151, H.156, V.160, E.222, R.260, Q.263, K.276, T.373 8 PLIP interactions: 8 interactions with chain B Hydrogen bonds: B:Y.151, B:Y.151, B:E.222, B:Q.263, B:T.373 Salt bridges: B:H.156, B:R.260, B:K.276

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Edwards, T.E. et al., Crystal structure of a putative hydrolase from Burkholderia cenocepacia. To be Published

Release Date

2014-06-25

Peptides

hydrolase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

hydrolase

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