SMTL ID : 4qmm.1

MST3 IN COMPLEX WITH AT-9283, 4-[(2-{4-[(CYCLOPROPYLCARBAMOYL)AMINO]-1H-PYRAZOL-3-YL}-1H-BENZIMIDAZOL-6-YL)METHYL]MORPHOLIN-4-IUM

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

monomer

Ligands

1 x 35R: 1-cyclopropyl-3-{3-[5-(morpholin-4-ylmethyl)-1H-benzimidazol-2-yl]-1H-pyrazol-4-yl}urea(Non-covalent)

35R.1: 15 residues within 4Å: Chain A: K.36, I.37, G.38, K.39, V.45, A.58, E.107, Y.108, L.109, G.112, D.116, L.158, Y.298, K.302 Ligands: ACT.2 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:E.107, A:L.109, A:L.109, A:K.302 Water bridges: A:K.39, A:D.169, A:D.169 Salt bridges: A:D.116

2 x ACT: ACETATE ION(Non-functional Binders)

ACT.2: 4 residues within 4Å: Chain A: K.36, I.37, G.38 Ligands: 35R.1 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:K.36 ACT.3: 1 residues within 4Å: Chain A: E.29 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.29

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.4: 4 residues within 4Å: Chain A: P.87, K.91, E.164, K.166 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:K.91, A:K.91, A:E.164, A:K.166 EDO.5: 4 residues within 4Å: Chain A: K.252, P.253, K.279, R.283 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.283, A:R.283 Water bridges: A:K.279, A:K.279

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.6: 1 residues within 4Å: Chain A: R.221 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Olesen, S.H. et al., Discovery of Diverse Small-Molecule Inhibitors of Mammalian Sterile20-like Kinase 3 (MST3). Chemmedchem (2016)

Release Date

2015-07-01

Peptides

Serine/threonine-protein kinase 24: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Serine/threonine-protein kinase 24

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