- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.41 Å
- Oligo State
- homo-trimer
- Ligands
- 9 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)
- 6 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.4: 3 residues within 4Å:- Chain A: N.552, T.554, I.648
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:N.552
EDO.5: 2 residues within 4Å:- Chain A: S.795, S.797
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:S.795, A:S.797
EDO.15: 3 residues within 4Å:- Chain B: N.552, T.554, I.648
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:N.552
EDO.16: 2 residues within 4Å:- Chain B: S.795, S.797
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:S.795, B:S.797
EDO.26: 3 residues within 4Å:- Chain C: N.552, T.554, I.648
1 PLIP interactions:1 interactions with chain C- Hydrogen bonds: C:N.552
EDO.27: 2 residues within 4Å:- Chain C: S.795, S.797
2 PLIP interactions:2 interactions with chain C- Hydrogen bonds: C:S.795, C:S.797
- 3 x ZN: ZINC ION(Non-covalent)
ZN.6: 5 residues within 4Å:- Chain A: H.25
- Chain B: H.25
- Chain C: H.25
- Ligands: ZN.17, ZN.28
3 PLIP interactions:1 interactions with chain C, 1 interactions with chain B, 1 interactions with chain A- Metal complexes: C:H.25, B:H.25, A:H.25
ZN.17: 5 residues within 4Å:- Chain A: H.25
- Chain B: H.25
- Chain C: H.25
- Ligands: ZN.6, ZN.28
3 PLIP interactions:1 interactions with chain C, 1 interactions with chain A, 1 interactions with chain B- Metal complexes: C:H.25, A:H.25, B:H.25
ZN.28: 5 residues within 4Å:- Chain A: H.25
- Chain B: H.25
- Chain C: H.25
- Ligands: ZN.6, ZN.17
3 PLIP interactions:1 interactions with chain C, 1 interactions with chain A, 1 interactions with chain B- Metal complexes: C:H.25, A:H.25, B:H.25
- 3 x SO4: SULFATE ION(Non-functional Binders)
SO4.7: 3 residues within 4Å:- Chain A: W.234, A.300, R.359
3 PLIP interactions:3 interactions with chain A- Water bridges: A:D.295, A:D.295
- Salt bridges: A:R.359
SO4.18: 3 residues within 4Å:- Chain B: W.234, A.300, R.359
3 PLIP interactions:3 interactions with chain B- Water bridges: B:D.295, B:D.295
- Salt bridges: B:R.359
SO4.29: 3 residues within 4Å:- Chain C: W.234, A.300, R.359
3 PLIP interactions:3 interactions with chain C- Water bridges: C:D.295, C:D.295
- Salt bridges: C:R.359
- 12 x CL: CHLORIDE ION(Non-functional Binders)
CL.8: 2 residues within 4Å:- Chain A: N.293, S.294
Ligand excluded by PLIPCL.9: 2 residues within 4Å:- Chain A: M.247, R.400
Ligand excluded by PLIPCL.10: 4 residues within 4Å:- Chain A: N.382, D.383, S.384, S.385
Ligand excluded by PLIPCL.11: 4 residues within 4Å:- Chain A: D.275, S.276, G.345, N.382
Ligand excluded by PLIPCL.19: 2 residues within 4Å:- Chain B: N.293, S.294
Ligand excluded by PLIPCL.20: 2 residues within 4Å:- Chain B: M.247, R.400
Ligand excluded by PLIPCL.21: 4 residues within 4Å:- Chain B: N.382, D.383, S.384, S.385
Ligand excluded by PLIPCL.22: 4 residues within 4Å:- Chain B: D.275, S.276, G.345, N.382
Ligand excluded by PLIPCL.30: 2 residues within 4Å:- Chain C: N.293, S.294
Ligand excluded by PLIPCL.31: 2 residues within 4Å:- Chain C: M.247, R.400
Ligand excluded by PLIPCL.32: 4 residues within 4Å:- Chain C: N.382, D.383, S.384, S.385
Ligand excluded by PLIPCL.33: 4 residues within 4Å:- Chain C: D.275, S.276, G.345, N.382
Ligand excluded by PLIP- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Prokhorov, N.S. et al., Function of bacteriophage G7C esterase tailspike in host cell adsorption. Mol. Microbiol. (2017)
- Release Date
- 2015-06-24
- Peptides
- Tail fiber protein: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.41 Å
- Oligo State
- homo-trimer
- Ligands
- 9 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)
- 6 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 3 x ZN: ZINC ION(Non-covalent)
- 3 x SO4: SULFATE ION(Non-functional Binders)
- 12 x CL: CHLORIDE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Prokhorov, N.S. et al., Function of bacteriophage G7C esterase tailspike in host cell adsorption. Mol. Microbiol. (2017)
- Release Date
- 2015-06-24
- Peptides
- Tail fiber protein: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
A