SMTL ID : 4qq2.1

Crystal structure of C1QL1

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-trimer

Ligands

18 x CD: CADMIUM ION(Non-covalent)(Non-functional Binders)

CD.1: 3 residues within 4Å: Chain A: D.89 Chain B: D.89 Chain C: D.89 Ligand excluded by PLIP CD.2: 3 residues within 4Å: Chain A: D.93 Chain B: D.93 Chain C: D.93 Ligand excluded by PLIP CD.3: 3 residues within 4Å: Chain A: D.93 Chain B: D.93 Chain C: D.93 Ligand excluded by PLIP CD.4: 1 residues within 4Å: Chain A: E.20 Ligand excluded by PLIP CD.5: 2 residues within 4Å: Chain A: D.72, D.114 Ligand excluded by PLIP CD.6: 1 residues within 4Å: Chain A: D.114 Ligand excluded by PLIP CD.7: 1 residues within 4Å: Chain A: H.119 Ligand excluded by PLIP CD.8: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP CD.9: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP CD.10: 3 residues within 4Å: Chain A: D.87 Chain B: D.87 Chain C: D.87 Ligand excluded by PLIP CD.11: 2 residues within 4Å: Chain B: H.19, E.23 Ligand excluded by PLIP CD.12: 1 residues within 4Å: Chain B: E.20 Ligand excluded by PLIP CD.13: 1 residues within 4Å: Chain B: D.114 Ligand excluded by PLIP CD.14: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP CD.15: 2 residues within 4Å: Chain B: D.72, D.114 Ligand excluded by PLIP CD.16: 2 residues within 4Å: Chain C: D.72, D.114 Ligand excluded by PLIP CD.17: 1 residues within 4Å: Chain C: D.104 Ligand excluded by PLIP CD.18: 1 residues within 4Å: Chain C: H.119 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ressl, S. et al., Structures of C1q-like Proteins Reveal Unique Features among the C1q/TNF Superfamily. Structure (2015)

Release Date

2015-04-15

Peptides

C1q-related factor: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

C1q-related factor