SMTL ID : 4qq4.1

CW-type zinc finger of MORC3 in complex with the amino terminus of histone H3

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

hetero-2-2-mer

Ligands

3 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.15, C.18, C.37, C.48 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.15, A:C.18, A:C.37, A:C.48 ZN.5: 4 residues within 4Å: Chain A: C.48 Chain B: C.48 Ligands: CL.3, CL.4 2 PLIP interactions: 1 interactions with chain B, 1 interactions with chain A Metal complexes: B:C.48, A:C.48 ZN.6: 4 residues within 4Å: Chain B: C.15, C.18, C.37, C.48 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.15, B:C.18, B:C.37, B:C.48

7 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)

UNX.2: 5 residues within 4Å: Chain A: P.32, K.34, Y.36, N.39 Chain B: E.49 No protein-ligand interaction detected (PLIP) UNX.7: 3 residues within 4Å: Chain B: D.16, A.17, Y.36 No protein-ligand interaction detected (PLIP) UNX.8: 2 residues within 4Å: Chain B: R.46, N.47 No protein-ligand interaction detected (PLIP) UNX.9: 2 residues within 4Å: Chain B: P.41, R.46 No protein-ligand interaction detected (PLIP) UNX.10: 2 residues within 4Å: Chain A: L.31 Chain C: A.1 No protein-ligand interaction detected (PLIP) UNX.11: 3 residues within 4Å: Chain C: T.3, K.4, Q.5 No protein-ligand interaction detected (PLIP) UNX.12: 3 residues within 4Å: Chain B: W.21 Chain D: R.2, T.3 No protein-ligand interaction detected (PLIP)

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 6 residues within 4Å: Chain A: Y.36, S.38, C.48 Chain B: C.48 Ligands: CL.4, ZN.5 Ligand excluded by PLIP CL.4: 6 residues within 4Å: Chain A: C.48 Chain B: Y.36, S.38, C.48 Ligands: CL.3, ZN.5 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, Y. et al., Family-wide Characterization of Histone Binding Abilities of Human CW Domain-containing Proteins. J.Biol.Chem. (2016)

Release Date

2014-08-20

Peptides

MORC family CW-type zinc finger protein 3: AB
Histone H3.3: CD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

MORC family CW-type zinc finger protein 3

Histone H3.3

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