SMTL ID : 4qqi.1

Crystal structure of ANKRA2-RFX7 complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.03 Å

Oligo State

hetero-1-1-mer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: N.136, G.169, Y.170, R.171, S.172 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:N.136, A:N.136, A:R.171, A:S.172 Salt bridges: A:R.171 SO4.2: 6 residues within 4Å: Chain A: N.136, H.137, V.138, K.139 Ligands: UNX.10, UNX.12 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:V.138, A:K.139 SO4.3: 3 residues within 4Å: Chain A: S.29, V.30, R.45 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:V.30 Salt bridges: A:R.45 SO4.4: 3 residues within 4Å: Chain A: D.117, V.118, N.119 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:V.118, A:N.119, A:N.119

11 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)

UNX.5: 2 residues within 4Å: Chain A: M.39, L.40 No protein-ligand interaction detected (PLIP) UNX.6: 4 residues within 4Å: Chain A: R.92, N.119, E.120, Y.121 No protein-ligand interaction detected (PLIP) UNX.7: 1 residues within 4Å: Chain A: T.20 No protein-ligand interaction detected (PLIP) UNX.8: 2 residues within 4Å: Chain A: H.54, T.55 No protein-ligand interaction detected (PLIP) UNX.9: 2 residues within 4Å: Chain A: I.72, A.73 No protein-ligand interaction detected (PLIP) UNX.10: 7 residues within 4Å: Chain A: T.105, H.137, V.138, K.139, C.140 Ligands: SO4.2, UNX.12 No protein-ligand interaction detected (PLIP) UNX.11: 3 residues within 4Å: Chain A: N.53, G.82, D.84 No protein-ligand interaction detected (PLIP) UNX.12: 5 residues within 4Å: Chain A: G.103, H.137 Ligands: SO4.2, UNX.10, UNL.13 No protein-ligand interaction detected (PLIP) UNX.14: 1 residues within 4Å: Chain B: H.5 No protein-ligand interaction detected (PLIP) UNX.15: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) UNX.16: 4 residues within 4Å: Chain A: H.134 Chain B: N.11, F.14, H.15 No protein-ligand interaction detected (PLIP)

1 x UNL: UNKNOWN LIGAND

UNL.13: 4 residues within 4Å: Chain A: G.103, T.105, D.106 Ligands: UNX.12 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:G.103, A:T.105, A:T.105, A:T.105, A:D.106, A:D.106

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xu, C. et al., Crystal structure of ANKRA2-RFX7 complex. To Be Published

Release Date

2014-09-03

Peptides

Ankyrin repeat family A protein 2: A
DNA-binding protein RFX7: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
X

Ankyrin repeat family A protein 2

DNA-binding protein RFX7

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