SMTL ID : 4qrp.3 (3 other biounits)

Crystal Structure of HLA B*0801 in complex with HSKKKCDEL and DD31 TCR

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.90 Å

Oligo State

hetero-1-1-mer

Ligands

5 x IOD: IODIDE ION(Non-functional Binders)

IOD.1: 5 residues within 4Å: Chain A: P.112, I.114, D.141, S.142, Q.143 Ligand excluded by PLIP IOD.2: 3 residues within 4Å: Chain A: L.49, K.50, G.58 Ligand excluded by PLIP IOD.3: 5 residues within 4Å: Chain A: L.45, Q.46, L.47 Chain B: H.105, F.106 Ligand excluded by PLIP IOD.4: 2 residues within 4Å: Chain B: N.204 Ligands: NA.5 Ligand excluded by PLIP IOD.6: 5 residues within 4Å: Chain A: Q.123, P.201 Chain B: S.132, E.133, A.134 Ligand excluded by PLIP

1 x NA: SODIUM ION(Non-functional Binders)

NA.5: 2 residues within 4Å: Chain B: R.206 Ligands: IOD.4 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:R.206

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nivarthi, U.K. et al., An Extensive Antigenic Footprint Underpins Immunodominant TCR Adaptability against a Hypervariable Viral Determinant. J.Immunol. (2014)

Release Date

2014-11-12

Peptides

DD31 TCR alpha chain: A
DD31 TCR beta chain: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
K

B
L

DD31 TCR alpha chain

DD31 TCR beta chain

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