SMTL ID : 4r01.1

Crystal structure of SP1627, a putative NADH-flavin reductase, from Streptococcus pneumoniae TIGR4

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-tetramer

Ligands

6 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 7 residues within 4Å: Chain A: A.8, A.9, N.10, G.11, V.32, R.33, S.34 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:N.10, A:N.10, A:G.11, A:R.33, A:S.34 Salt bridges: A:R.33 SO4.4: 6 residues within 4Å: Chain B: A.8, A.9, N.10, V.32, R.33, S.34 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:N.10, B:N.10, B:G.11, B:R.33, B:S.34 Salt bridges: B:R.33 SO4.5: 3 residues within 4Å: Chain B: N.85, A.89, N.143 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:N.85, B:N.143, B:N.143 SO4.8: 7 residues within 4Å: Chain C: A.8, A.9, N.10, G.11, V.32, R.33, S.34 6 PLIP interactions: 6 interactions with chain C Hydrogen bonds: C:N.10, C:N.10, C:G.11, C:R.33, C:S.34 Salt bridges: C:R.33 SO4.11: 6 residues within 4Å: Chain D: A.8, A.9, N.10, V.32, R.33, S.34 6 PLIP interactions: 6 interactions with chain D Hydrogen bonds: D:N.10, D:N.10, D:G.11, D:R.33, D:S.34 Salt bridges: D:R.33 SO4.12: 3 residues within 4Å: Chain D: N.85, A.89, N.143 3 PLIP interactions: 3 interactions with chain D Hydrogen bonds: D:N.85, D:N.143, D:N.143

8 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 1 residues within 4Å: Chain A: E.170 Ligand excluded by PLIP CL.3: 1 residues within 4Å: Chain A: E.160 Ligand excluded by PLIP CL.6: 3 residues within 4Å: Chain B: G.169, E.170, I.171 Ligand excluded by PLIP CL.7: 2 residues within 4Å: Chain B: S.34, E.35 Ligand excluded by PLIP CL.9: 1 residues within 4Å: Chain C: E.170 Ligand excluded by PLIP CL.10: 1 residues within 4Å: Chain C: E.160 Ligand excluded by PLIP CL.13: 3 residues within 4Å: Chain D: G.169, E.170, I.171 Ligand excluded by PLIP CL.14: 2 residues within 4Å: Chain D: S.34, E.35 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Stogios, P.J. et al., Crystal structure of SP1627, a putative NADH-flavin reductase, from Streptococcus pneumoniae TIGR4. TO BE PUBLISHED

Release Date

2014-08-27

Peptides

putative NADH-flavin reductase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

putative NADH-flavin reductase