- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.20 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x MG: MAGNESIUM ION(Non-covalent)
- 4 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER(Non-covalent)
ANP.2: 24 residues within 4Å:- Chain A: P.22, I.23, D.24, L.30, L.52, T.53, V.54, P.109, I.113, I.127, A.128, H.130, R.131, T.135, Y.137, G.140, S.141, N.142, A.143
- Chain C: Y.60, S.108, K.110, D.111
- Ligands: MG.1
24 PLIP interactions:21 interactions with chain A, 3 interactions with chain C- Hydrogen bonds: A:V.54, A:V.54, A:A.128, A:R.131, A:T.135, A:S.141, A:A.143, C:S.108, C:K.110, C:K.110
- Water bridges: A:P.22, A:P.22, A:D.24, A:R.131, A:R.131, A:R.131, A:R.131, A:R.131, A:N.142, A:N.142, A:N.142, A:N.142
- Salt bridges: A:H.130, A:R.131
ANP.4: 20 residues within 4Å:- Chain B: P.22, I.23, D.24, L.52, T.53, V.54, P.109, I.113, I.127, A.128, H.130, R.131, G.140, S.141, N.142, A.143
- Chain D: Y.60, K.110, D.111
- Ligands: MG.3
23 PLIP interactions:20 interactions with chain B, 3 interactions with chain D- Hydrogen bonds: B:D.24, B:T.53, B:V.54, B:V.54, B:A.128, B:R.131, B:R.131, B:S.141, B:A.143, D:K.110, D:K.110, D:D.111
- Water bridges: B:P.22, B:P.22, B:D.24, B:D.24, B:R.131, B:R.131, B:R.131, B:N.142, B:N.142
- Salt bridges: B:H.130, B:R.131
ANP.6: 24 residues within 4Å:- Chain A: Y.60, S.108, K.110, D.111
- Chain C: P.22, I.23, D.24, L.30, L.52, T.53, V.54, P.109, I.113, I.127, A.128, H.130, R.131, T.135, Y.137, G.140, S.141, N.142, A.143
- Ligands: MG.5
26 PLIP interactions:23 interactions with chain C, 3 interactions with chain A- Hydrogen bonds: C:D.24, C:V.54, C:V.54, C:A.128, C:R.131, C:T.135, C:T.135, C:S.141, C:A.143, A:S.108, A:K.110, A:K.110
- Water bridges: C:P.22, C:P.22, C:D.24, C:R.131, C:R.131, C:R.131, C:R.131, C:R.131, C:N.142, C:N.142, C:N.142, C:N.142
- Salt bridges: C:H.130, C:R.131
ANP.8: 20 residues within 4Å:- Chain B: Y.60, K.110, D.111
- Chain D: P.22, I.23, D.24, L.52, T.53, V.54, P.109, I.113, I.127, A.128, H.130, R.131, G.140, S.141, N.142, A.143
- Ligands: MG.7
21 PLIP interactions:3 interactions with chain B, 18 interactions with chain D- Hydrogen bonds: B:K.110, B:K.110, B:D.111, D:V.54, D:V.54, D:A.128, D:R.131, D:R.131, D:S.141, D:A.143
- Water bridges: D:P.22, D:P.22, D:D.24, D:D.24, D:R.131, D:R.131, D:R.131, D:N.142, D:N.142
- Salt bridges: D:H.130, D:R.131
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Bangera, M. et al., Structural and functional analysis of two universal stress proteins YdaA and YnaF from Salmonella typhimurium: possible roles in microbial stress tolerance. J.Struct.Biol. (2015)
- Release Date
- 2015-02-04
- Peptides
- Universal stress protein F: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.20 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x MG: MAGNESIUM ION(Non-covalent)
- 4 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Bangera, M. et al., Structural and functional analysis of two universal stress proteins YdaA and YnaF from Salmonella typhimurium: possible roles in microbial stress tolerance. J.Struct.Biol. (2015)
- Release Date
- 2015-02-04
- Peptides
- Universal stress protein F: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B