SMTL ID : 4r4u.2 (1 other biounit)

Crystal structure of acyl-CoA thioesterase tesB from Yersinia pestis in complex with coenzyme A

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

homo-dimer

Ligands

1 x COA: COENZYME A(Non-covalent)

COA.1: 17 residues within 4Å: Chain A: V.37, V.42, F.67, L.68, R.69, P.70, G.71, I.104, F.105, Q.228, T.231, R.286 Chain B: R.85, G.87, N.88, S.89, F.90 10 PLIP interactions: 4 interactions with chain B, 6 interactions with chain A Hydrogen bonds: B:N.88, B:S.89, B:F.90, A:F.67, A:R.69, A:Q.228 Salt bridges: B:R.85, A:R.286 Hydrophobic interactions: A:F.67 Water bridges: A:F.67

1 x NA: SODIUM ION(Non-functional Binders)

NA.2: 2 residues within 4Å: Chain A: V.81, E.82 No protein-ligand interaction detected (PLIP)

1 x MLA: MALONIC ACID(Non-covalent)

MLA.3: 9 residues within 4Å: Chain A: H.64, S.65, Y.66, R.94, Y.106, M.107, T.108 Chain B: H.64, T.108 9 PLIP interactions: 5 interactions with chain B, 4 interactions with chain A Hydrogen bonds: B:T.108, B:T.108, B:T.108, A:T.108 Salt bridges: B:H.64, B:R.94, A:R.94 Water bridges: A:H.64, A:H.64

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Swarbrick, C.M. et al., Structural and functional characterization of TesB from Yersinia pestis reveals a unique octameric arrangement of hotdog domains. Acta Crystallogr.,Sect.D (2015)

Release Date

2015-04-15

Peptides

Acyl-CoA thioesterase II: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

B
C

Acyl-CoA thioesterase II

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