SMTL ID : 4ra7.1 (1 other biounit)

Structure of a putative peptidoglycan glycosyltransferase from Atopobium parvulum in complex with nafcillin

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.94 Å

Oligo State

monomer

Ligands

1 x NXU: (2R,4S)-2-[(1R)-2-hydroxy-1-{[(2-hydroxynaphthalen-1-yl)carbonyl]amino}ethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid(Covalent)

NXU.1: 14 residues within 4Å: Chain A: G.180, S.181, Y.219, S.236, N.238, T.375, K.389, T.390, G.391, T.392, A.393, D.394, F.400, L.429 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:Y.219, A:Y.219, A:T.375, A:T.392 Hydrogen bonds: A:S.181, A:S.236, A:S.236, A:N.238, A:T.375, A:T.390, A:T.392, A:T.392, A:T.392, A:T.392 Salt bridges: A:K.389 pi-Stacking: A:F.400

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Filippova, E.V. et al., Structure of a putative peptidoglycan glycosyltransferase from Atopobium parvulum in complex with nafcillin. To be Published

Release Date

2014-09-24

Peptides

Peptidoglycan glycosyltransferase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Peptidoglycan glycosyltransferase

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