SMTL ID : 4rav.1

Crystal structure of scFvC4 in complex with the first 17 AA of huntingtin

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

hetero-oligomer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: S.62, R.64, Q.82 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.62, A:S.62, A:Q.82 Salt bridges: A:R.64 SO4.2: 4 residues within 4Å: Chain C: S.62, R.64, Q.82, E.84 4 PLIP interactions: 4 interactions with chain C Hydrogen bonds: C:S.62, C:S.62, C:Q.82 Salt bridges: C:R.64 SO4.3: 3 residues within 4Å: Chain C: K.45, A.46 Chain D: R.107 3 PLIP interactions: 2 interactions with chain C, 1 interactions with chain D Hydrogen bonds: C:A.46, C:A.46 Salt bridges: D:R.107 SO4.4: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

De Genst, E. et al., Structure of a single-chain fv bound to the 17 N-terminal residues of huntingtin provides insights into pathogenic amyloid formation and suppression. J.Mol.Biol. (2015)

Release Date

2015-07-29

Peptides

Single-chain Fv, VL: AC
single-chain Fv, VH: BD
Huntingtin: EF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

C
D

B
A

D
C

E
E

F
F

Single-chain Fv, VL

single-chain Fv, VH

Huntingtin