SMTL ID : 4rca.1

Crystal structure of human PTPdelta and human Slitrk1 complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.99 Å

Oligo State

hetero-1-1-mer

Ligands

3 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Non-covalent)

NAG.1: 2 residues within 4Å: Chain A: N.279, Q.296 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.279 NAG.2: 2 residues within 4Å: Chain A: N.234, E.270 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.234 NAG.4: 2 residues within 4Å: Chain B: N.234, E.235 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:N.234

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 7 residues within 4Å: Chain B: L.216, G.218, R.219, V.220, D.232, L.233, N.234 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:V.220, B:V.220, B:L.233, B:N.234

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Um, J.W. et al., Structural basis for LAR-RPTP/Slitrk complex-mediated synaptic adhesion. Nat Commun (2014)

Release Date

2014-11-19

Peptides

Receptor-type tyrosine-protein phosphatase delta: A
SLIT and NTRK-like protein 1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Receptor-type tyrosine-protein phosphatase delta

SLIT and NTRK-like protein 1