SMTL ID : 4rdv.2 (1 other biounit)

The structure of N-formimino-L-Glutamate Iminohydrolase from Pseudomonas aeruginosa complexed with N-formimino-L-Aspartate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.08 Å

Oligo State

homo-dimer

Ligands

2 x NFQ: N-[(E)-iminomethyl]-L-aspartic acid(Non-covalent)

NFQ.1: 14 residues within 4Å: Chain A: H.58, Q.61, F.78, W.81, R.82, M.85, Y.121, H.206, R.209, H.232, E.235, H.269, L.298, D.320 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:F.78 Hydrogen bonds: A:Q.61, A:Y.121, A:E.235 Water bridges: A:Q.61, A:R.82, A:R.82, A:R.209, A:D.320 Salt bridges: A:H.58, A:R.82, A:H.206, A:H.206, A:R.209, A:H.232, A:H.232 NFQ.6: 13 residues within 4Å: Chain B: H.58, Q.61, F.78, W.81, R.82, M.85, Y.121, H.206, R.209, H.232, E.235, L.298, D.320 17 PLIP interactions: 17 interactions with chain B Hydrophobic interactions: B:F.78 Hydrogen bonds: B:Q.61, B:Y.121, B:E.235 Water bridges: B:Q.61, B:R.82, B:R.82, B:R.209, B:E.235, B:D.320 Salt bridges: B:H.58, B:R.82, B:H.206, B:H.206, B:R.209, B:H.232, B:H.232

2 x ZN: ZINC ION(Non-covalent)

ZN.2: 4 residues within 4Å: Chain A: H.56, H.58, H.232, D.320 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.56, A:H.58, A:H.232, A:D.320, H2O.1 ZN.7: 4 residues within 4Å: Chain B: H.56, H.58, H.232, D.320 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:H.56, B:H.58, B:H.232, B:D.320, H2O.10

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 5 residues within 4Å: Chain A: Q.237, R.250, H.272, A.273 Chain B: R.343 5 PLIP interactions: 2 interactions with chain B, 3 interactions with chain A Hydrogen bonds: B:R.343, B:R.343, A:Q.237, A:R.250, A:R.250 GOL.4: 4 residues within 4Å: Chain A: H.161, T.212, Q.214, Q.215 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:H.161, A:T.212, A:Q.214

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.5: 3 residues within 4Å: Chain A: M.355, G.402, D.403 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.403 Water bridges: A:Q.353, A:A.404

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.8: 3 residues within 4Å: Chain B: H.161, T.212, Q.215 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:T.212 Water bridges: B:H.161, B:T.212, B:Q.214 Salt bridges: B:H.161

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fedorov, A.A. et al., The structure of N-formimino-L-Glutamate Iminohydrolase from Pseudomonas aeruginosa complexed with N-formimino-L-Aspartate. To be Published

Release Date

2014-10-08

Peptides

N-FORMIMINO-L-GLUTAMATE IMINOHYDROLASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

N-FORMIMINO-L-GLUTAMATE IMINOHYDROLASE

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