SMTL ID : 4rfq.1

Human Methyltransferase-Like 18

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-dimer

Ligands

2 x SAM: S-ADENOSYLMETHIONINE(Non-covalent)

SAM.1: 20 residues within 4Å: Chain A: P.17, E.28, P.29, I.88, W.89, T.92, G.115, C.116, G.117, Q.136, D.137, Y.138, G.188, E.189, W.190, S.213, E.214, T.215, Y.217, Y.221 18 PLIP interactions: 18 interactions with chain A Hydrogen bonds: A:W.89, A:T.92, A:G.115, A:G.115, A:G.117, A:Q.136, A:D.137, A:Y.138, A:E.189, A:E.189, A:W.190 Water bridges: A:K.87, A:S.213 Salt bridges: A:E.28 pi-Stacking: A:Y.138, A:W.190, A:W.190, A:W.190 SAM.14: 20 residues within 4Å: Chain B: P.17, E.28, P.29, I.88, W.89, T.92, G.115, C.116, G.117, Q.136, D.137, Y.138, G.188, E.189, W.190, S.213, E.214, T.215, Y.217, Y.221 17 PLIP interactions: 17 interactions with chain B Hydrogen bonds: B:W.89, B:T.92, B:G.115, B:G.115, B:G.117, B:Q.136, B:D.137, B:Y.138, B:E.189, B:W.190 Water bridges: B:K.87, B:S.213 Salt bridges: B:E.28 pi-Stacking: B:Y.138, B:W.190, B:W.190, B:W.190

24 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)

UNX.2: 2 residues within 4Å: Chain A: K.268, T.269 Ligand excluded by PLIP UNX.3: 2 residues within 4Å: Chain A: K.273, I.274 Ligand excluded by PLIP UNX.4: 3 residues within 4Å: Chain A: K.206, S.234, K.235 Ligand excluded by PLIP UNX.5: 4 residues within 4Å: Chain A: K.87, W.89, E.90, K.244 Ligand excluded by PLIP UNX.6: 1 residues within 4Å: Chain A: G.249 Ligand excluded by PLIP UNX.7: 3 residues within 4Å: Chain A: E.41, H.42, A.43 Ligand excluded by PLIP UNX.8: 2 residues within 4Å: Chain A: S.19, A.20 Ligand excluded by PLIP UNX.9: 3 residues within 4Å: Chain A: P.45, K.46, D.47 Ligand excluded by PLIP UNX.10: 4 residues within 4Å: Chain A: K.49, L.52, E.158 Chain B: P.10 Ligand excluded by PLIP UNX.11: 4 residues within 4Å: Chain A: P.45, D.47, K.50, M.51 Ligand excluded by PLIP UNX.12: 2 residues within 4Å: Chain A: F.260, R.264 Ligand excluded by PLIP UNX.13: 2 residues within 4Å: Chain A: N.218, D.220 Ligand excluded by PLIP UNX.15: 2 residues within 4Å: Chain B: K.268, T.269 Ligand excluded by PLIP UNX.16: 2 residues within 4Å: Chain B: K.273, I.274 Ligand excluded by PLIP UNX.17: 3 residues within 4Å: Chain B: K.206, S.234, K.235 Ligand excluded by PLIP UNX.18: 4 residues within 4Å: Chain B: K.87, W.89, E.90, K.244 Ligand excluded by PLIP UNX.19: 1 residues within 4Å: Chain B: G.249 Ligand excluded by PLIP UNX.20: 3 residues within 4Å: Chain B: E.41, H.42, A.43 Ligand excluded by PLIP UNX.21: 2 residues within 4Å: Chain B: S.19, A.20 Ligand excluded by PLIP UNX.22: 3 residues within 4Å: Chain B: P.45, K.46, D.47 Ligand excluded by PLIP UNX.23: 4 residues within 4Å: Chain A: P.10 Chain B: K.49, L.52, E.158 Ligand excluded by PLIP UNX.24: 4 residues within 4Å: Chain B: P.45, D.47, K.50, M.51 Ligand excluded by PLIP UNX.25: 2 residues within 4Å: Chain B: F.260, R.264 Ligand excluded by PLIP UNX.26: 2 residues within 4Å: Chain B: N.218, D.220 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ravichandran, M. et al., Human Methyltransferase-Like 18. TO BE PUBLISHED

Release Date

2014-10-08

Peptides

Histidine protein methyltransferase 1 homolog: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Histidine protein methyltransferase 1 homolog