SMTL ID : 4rkx.1

Identification and characterization of a small molecule inhibitor of S. pyogenes SpeB.

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.59 Å

Oligo State

monomer

Ligands

1 x NO3: NITRATE ION(Non-functional Binders)

NO3.1: 4 residues within 4Å: Chain A: F.222, N.228, P.229, S.230 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.230, A:S.230

1 x 3S9: benzyl (cyanomethyl)carbamate(Non-covalent)

3S9.2: 12 residues within 4Å: Chain A: Q.17, C.47, V.48, S.135, G.136, S.137, A.138, Q.187, G.188, V.189, G.194, H.195 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:Q.187, A:Q.187, A:V.189 Hydrogen bonds: A:Q.17, A:C.47, A:S.137, A:G.194 Water bridges: A:V.48, A:S.135

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, A.Y. et al., Identification and Co-complex Structure of a New S. pyogenes SpeB Small Molecule Inhibitor. Biochemistry (2015)

Release Date

2015-07-22

Peptides

Streptopain: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Streptopain

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