SMTL ID : 4rl6.1

Crystal Structure of the Q04L03_STRP2 protein from Streptococcus pneumoniae. Northeast Structural Genomics Consortium Target SpR105

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.79 Å

Oligo State

homo-dimer

Ligands

2 x NDP: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NDP.1: 23 residues within 4Å: Chain A: C.9, G.10, G.11, V.12, S.34, R.35, T.36, K.39, L.60, D.61, A.62, D.63, A.84, L.85, P.86, Q.88, T.106, A.107, G.160, F.161, D.162, P.163, T.366 20 PLIP interactions: 20 interactions with chain A Hydrophobic interactions: A:T.366 Hydrogen bonds: A:C.9, A:C.9, A:G.11, A:V.12, A:S.34, A:R.35, A:T.36, A:T.36, A:D.61, A:A.62, A:D.63, A:A.84, A:F.161, A:D.162, A:D.162, A:D.162 Salt bridges: A:R.35, A:K.39 pi-Cation interactions: A:R.35 NDP.2: 24 residues within 4Å: Chain B: G.8, C.9, G.10, G.11, V.12, S.34, R.35, T.36, K.39, L.60, D.61, A.62, D.63, A.84, L.85, P.86, Q.88, T.106, A.107, G.160, F.161, D.162, P.163, T.366 20 PLIP interactions: 20 interactions with chain B Hydrophobic interactions: B:T.106, B:T.366 Hydrogen bonds: B:C.9, B:C.9, B:G.11, B:V.12, B:S.34, B:R.35, B:T.36, B:T.36, B:D.61, B:A.62, B:A.84, B:F.161, B:D.162, B:D.162, B:D.162 Salt bridges: B:R.35, B:K.39 pi-Cation interactions: B:R.35

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Vorobiev, S. et al., Crystal Structure of the Q04L03_STRP2 protein from Streptococcus pneumoniae. To be Published

Release Date

2014-11-05

Peptides

Saccharopine dehydrogenase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Saccharopine dehydrogenase