SMTL ID : 4rn6.1 (1 other biounit)

Structure of prethrombin-2 mutant s195a bound to the active site inhibitor argatroban

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

monomer

Ligands

1 x 15U: (2R,4R)-4-methyl-1-(N~2~-{[(3S)-3-methyl-1,2,3,4-tetrahydroquinolin-8-yl]sulfonyl}-L-arginyl)piperidine-2-carboxylic acid(Non-covalent)

15U.1: 13 residues within 4Å: Chain A: H.74, Y.78, W.81, E.125, L.127, L.175, W.179, A.231, A.236, W.258, G.259, E.260, G.261 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:Y.78, A:W.81, A:L.127, A:W.179, A:W.179, A:W.179 Hydrogen bonds: A:G.259, A:G.259, A:G.259 Salt bridges: A:H.74

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pozzi, N. et al., Autoactivation of thrombin precursors. J.Biol.Chem. (2013)

Release Date

2014-11-05

Peptides

Thrombin heavy chain: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Thrombin heavy chain

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