SMTL ID : 4rop.1 (1 other biounit)

Crystal structure of enolase from Synechococcus elongatus

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

homo-octamer

Ligands

32 x CA: CALCIUM ION(Non-covalent)

CA.1: 1 residues within 4Å: Chain A: N.158 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:N.158, H2O.1, H2O.4, H2O.6 CA.2: 1 residues within 4Å: Chain A: E.411 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.411, A:E.411, H2O.4, H2O.6 CA.3: 1 residues within 4Å: Chain A: S.125 5 PLIP interactions: 5 Ligand-Water interactions Metal complexes: H2O.2, H2O.5, H2O.6, H2O.6, H2O.6 CA.4: 4 residues within 4Å: Chain A: D.242, E.283, D.310, K.386 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.242, A:E.283, A:D.310, H2O.1, H2O.3 CA.5: 1 residues within 4Å: Chain B: N.158 4 PLIP interactions: 1 interactions with chain B, 3 Ligand-Water interactions Metal complexes: B:N.158, H2O.7, H2O.10, H2O.12 CA.6: 1 residues within 4Å: Chain B: E.411 4 PLIP interactions: 2 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:E.411, B:E.411, H2O.10, H2O.12 CA.7: 1 residues within 4Å: Chain B: S.125 5 PLIP interactions: 5 Ligand-Water interactions Metal complexes: H2O.8, H2O.11, H2O.12, H2O.12, H2O.12 CA.8: 4 residues within 4Å: Chain B: D.242, E.283, D.310, K.386 5 PLIP interactions: 3 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:D.242, B:E.283, B:D.310, H2O.7, H2O.9 CA.9: 1 residues within 4Å: Chain C: N.158 4 PLIP interactions: 1 interactions with chain C, 3 Ligand-Water interactions Metal complexes: C:N.158, H2O.13, H2O.16, H2O.18 CA.10: 1 residues within 4Å: Chain C: E.411 4 PLIP interactions: 2 interactions with chain C, 2 Ligand-Water interactions Metal complexes: C:E.411, C:E.411, H2O.16, H2O.17 CA.11: 1 residues within 4Å: Chain C: S.125 5 PLIP interactions: 5 Ligand-Water interactions Metal complexes: H2O.14, H2O.16, H2O.18, H2O.18, H2O.18 CA.12: 4 residues within 4Å: Chain C: D.242, E.283, D.310, K.386 5 PLIP interactions: 3 interactions with chain C, 2 Ligand-Water interactions Metal complexes: C:D.242, C:E.283, C:D.310, H2O.13, H2O.15 CA.13: 1 residues within 4Å: Chain D: N.158 4 PLIP interactions: 1 interactions with chain D, 3 Ligand-Water interactions Metal complexes: D:N.158, H2O.19, H2O.22, H2O.24 CA.14: 1 residues within 4Å: Chain D: E.411 4 PLIP interactions: 2 interactions with chain D, 2 Ligand-Water interactions Metal complexes: D:E.411, D:E.411, H2O.22, H2O.23 CA.15: 1 residues within 4Å: Chain D: S.125 5 PLIP interactions: 5 Ligand-Water interactions Metal complexes: H2O.20, H2O.22, H2O.24, H2O.24, H2O.24 CA.16: 4 residues within 4Å: Chain D: D.242, E.283, D.310, K.386 5 PLIP interactions: 3 interactions with chain D, 2 Ligand-Water interactions Metal complexes: D:D.242, D:E.283, D:D.310, H2O.18, H2O.21 CA.17: 1 residues within 4Å: Chain E: N.158 4 PLIP interactions: 1 interactions with chain E, 3 Ligand-Water interactions Metal complexes: E:N.158, H2O.25, H2O.28, H2O.30 CA.18: 1 residues within 4Å: Chain E: E.411 4 PLIP interactions: 2 interactions with chain E, 2 Ligand-Water interactions Metal complexes: E:E.411, E:E.411, H2O.28, H2O.29 CA.19: 1 residues within 4Å: Chain E: S.125 5 PLIP interactions: 5 Ligand-Water interactions Metal complexes: H2O.26, H2O.28, H2O.30, H2O.30, H2O.30 CA.20: 4 residues within 4Å: Chain E: D.242, E.283, D.310, K.386 5 PLIP interactions: 3 interactions with chain E, 2 Ligand-Water interactions Metal complexes: E:D.242, E:E.283, E:D.310, H2O.24, H2O.27 CA.21: 1 residues within 4Å: Chain F: N.158 4 PLIP interactions: 1 interactions with chain F, 3 Ligand-Water interactions Metal complexes: F:N.158, H2O.31, H2O.34, H2O.36 CA.22: 1 residues within 4Å: Chain F: E.411 4 PLIP interactions: 2 interactions with chain F, 2 Ligand-Water interactions Metal complexes: F:E.411, F:E.411, H2O.34, H2O.35 CA.23: 1 residues within 4Å: Chain F: S.125 5 PLIP interactions: 5 Ligand-Water interactions Metal complexes: H2O.32, H2O.34, H2O.35, H2O.36, H2O.36 CA.24: 4 residues within 4Å: Chain F: D.242, E.283, D.310, K.386 5 PLIP interactions: 3 interactions with chain F, 2 Ligand-Water interactions Metal complexes: F:D.242, F:E.283, F:D.310, H2O.30, H2O.33 CA.25: 1 residues within 4Å: Chain G: N.158 4 PLIP interactions: 1 interactions with chain G, 3 Ligand-Water interactions Metal complexes: G:N.158, H2O.36, H2O.39, H2O.41 CA.26: 1 residues within 4Å: Chain G: E.411 4 PLIP interactions: 2 interactions with chain G, 2 Ligand-Water interactions Metal complexes: G:E.411, G:E.411, H2O.40, H2O.41 CA.27: 1 residues within 4Å: Chain G: S.125 5 PLIP interactions: 5 Ligand-Water interactions Metal complexes: H2O.38, H2O.40, H2O.41, H2O.42, H2O.42 CA.28: 4 residues within 4Å: Chain G: D.242, E.283, D.310, K.386 5 PLIP interactions: 3 interactions with chain G, 2 Ligand-Water interactions Metal complexes: G:D.242, G:E.283, G:D.310, H2O.36, H2O.39 CA.29: 1 residues within 4Å: Chain H: N.158 4 PLIP interactions: 1 interactions with chain H, 3 Ligand-Water interactions Metal complexes: H:N.158, H2O.42, H2O.45, H2O.47 CA.30: 1 residues within 4Å: Chain H: E.411 4 PLIP interactions: 2 interactions with chain H, 2 Ligand-Water interactions Metal complexes: H:E.411, H:E.411, H2O.46, H2O.47 CA.31: 1 residues within 4Å: Chain H: S.125 5 PLIP interactions: 5 Ligand-Water interactions Metal complexes: H2O.43, H2O.46, H2O.47, H2O.48, H2O.48 CA.32: 4 residues within 4Å: Chain H: D.242, E.283, D.310, K.386 5 PLIP interactions: 3 interactions with chain H, 2 Ligand-Water interactions Metal complexes: H:D.242, H:E.283, H:D.310, H2O.42, H2O.45

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gonzalez, J.M. et al., The structure of Synechococcus elongatus enolase reveals key aspects of phosphoenolpyruvate binding. Acta Crystallogr.,Sect.F (2022)

Release Date

2014-12-17

Peptides

Enolase: ABCDEFGH

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

E
A

F
A

G
A

H
A

Enolase

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