SMTL ID : 4rpi.2 (1 other biounit)

Crystal Structure of Nicotinate Mononucleotide Adenylyltransferase from Mycobacterium tuberculosis

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.42 Å

Oligo State

homo-dimer

Ligands

4 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.1: 3 residues within 4Å: Chain A: Y.62, S.76, V.77 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:V.77 DMS.2: 5 residues within 4Å: Chain A: R.144, N.145, E.146, H.147, I.148 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:H.147, A:I.148 DMS.5: 3 residues within 4Å: Chain B: Y.62, S.76, V.77 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:V.77 DMS.6: 2 residues within 4Å: Chain B: W.186, Q.195 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:Q.195

2 x EPE: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID(Non-functional Binders)

EPE.3: 7 residues within 4Å: Chain A: W.186, Y.187, D.191 Chain B: S.71, N.72, P.73, R.74 5 PLIP interactions: 3 interactions with chain A, 2 interactions with chain B Water bridges: A:D.191 Salt bridges: A:D.191, A:D.191, B:R.74 Hydrogen bonds: B:S.71 EPE.4: 7 residues within 4Å: Chain A: S.71, N.72, P.73, R.74 Chain B: W.186, Y.187, D.191 4 PLIP interactions: 2 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:S.71 Salt bridges: A:R.74, B:D.191, B:D.191

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rodionova, I.A. et al., Mycobacterial nicotinate mononucleotide adenylyltransferase: structure, mechanism, and implications for drug discovery. J. Biol. Chem. (2015)

Release Date

2015-01-28

Peptides

nicotinate-nucleotide adenylyltransferase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
D

nicotinate-nucleotide adenylyltransferase

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