SMTL ID : 4rpo.2 (1 other biounit)

PcpR inducer binding domain (Complex with 2,4,6-trichlorophenol)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

homo-dimer

Ligands

2 x T6C: 2,4,6-trichlorophenol(Non-covalent)

T6C.1: 12 residues within 4Å: Chain A: S.20, F.22, G.23, L.26, F.67, G.68, F.83, E.85, H.122, F.147, P.164, V.191 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:L.26, A:P.164, A:V.191 Hydrogen bonds: A:H.122 pi-Stacking: A:F.22 Halogen bonds: A:F.67, A:E.85 T6C.3: 11 residues within 4Å: Chain B: S.20, F.22, G.23, F.67, G.68, F.83, E.85, H.122, F.147, P.164, V.191 7 PLIP interactions: 7 interactions with chain B Hydrophobic interactions: B:P.164, B:V.191 Hydrogen bonds: B:H.122 Water bridges: B:S.20 pi-Stacking: B:F.22 Halogen bonds: B:F.67, B:E.85

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.2: 7 residues within 4Å: Chain A: E.156 Chain B: F.22, A.25, L.26, P.29, R.30, W.170 2 PLIP interactions: 1 interactions with chain A, 1 interactions with chain B Salt bridges: A:E.156 Hydrogen bonds: B:R.30

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hayes, R.P. et al., Structures of the Inducer-Binding Domain of Pentachlorophenol-Degrading Gene Regulator PcpR from Sphingobium chlorophenolicum. Int J Mol Sci (2014)

Release Date

2014-11-26

Peptides

PCP degradation transcriptional activation protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

PCP degradation transcriptional activation protein

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